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ITS phylogenetic reconstruction (Orobanchaceae)
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Knowledge graph centered on ITS phylogenetic reconstruction (Orobanchaceae) with 37 nodes and 121 connections. Top connected: Hummingbird, Ipomopsis, Delphinium, I. aggregata, Ipomopsis aggregata.
Description
Standard molecular phylogenetic approach using ITS sequences to reconstruct evolutionary relationships and calculate phylogenetic distances between plant species. Includes sequence alignment, tree inference, and time calibration.
Typical Equipment
- R software
- msa package
- seqinr package
- ape package
Output Measurements
- phylogenetic distance
- evolutionary relationships