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Protocols

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9 protocols

measurement

PAR measurement

Standardized measurement of PAR using quantum light sensors during midday cloudless conditions to quantify light environment across study sites.

light environment3 papersLightScout Light Sensor Reader, Quantum Light Sensor (Spectrum Technologies)
experimentalstandardized

Snow melt manipulation experiment (Aphididae)

Experimental advancement of snow melt timing using shade cloth application to test effects on host plant phenology and aphid-plant interactions. Combined with temperature manipulation using open-top w...

climate manipulation3 papersPVC poles, EasyShade 50% Black Bulk Shade Cloth UV Resistant...
analytical

nonmetric multidimensional scaling (Plantae)

PERMANOVA testing of volatile composition differences across species and years, with NMDS visualization of chemical dissimilarity patterns.

multivariate statistics3 papersR-Studio, Vegan Package
analytical

AIC model selection (Plantae)

Multiple candidate models incorporating different combinations of climate predictors were fitted and ranked using Akaike Information Criterion to select optimal models for demographic functions.

statistical modeling2 papersStatistical modeling software
analyticalstandardized

Honeydew collection and chemical analysis

Collection of aphid honeydew on aluminum foil substrates followed by LC-MS/MS analysis to quantify sugar and amino acid composition as indicators of plant quality and ant-aphid mutualism benefits.

biochemical2 papersaluminum foil squares, stereoscope...
analytical

ImageJ ellipsis tool analysis

Photographic analysis using ImageJ software with ellipsis tool to quantify percent vegetation coverage around each sampling point as a fraction of total photographed area.

image analysis2 paperscamera, ImageJ software...
computational

Climate wetness index calculation

Calculation of site-specific wetness indices using mean annual precipitation and temperature data to characterize local climate conditions for experimental sites.

environmental characterization1 paperClimate databases, GIS software
experimental

clay caterpillar predation bioassay

Artificial prey made from green modeling clay are deployed on tree branches to estimate bird attack rates over a standardized time period. Attack marks on clay allow identification of predator type an...

predation assay1 paperClay extruder (Walnut Hollow), Green nontoxic modeling clay (Sargent Art)...
observational

eBird citizen science protocol

Use existing citizen science bird observation data from eBird database to characterize bird abundance and diversity patterns across environmental gradients. Data is filtered for quality and geographic...

community survey1 papereBird database, R package Elevatr (Hollister et al., 2021)...