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Protocols

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16 protocols

analyticalstandardized

Mantel test (Plantae)

Meta-analytical approach to synthesize population-level climate sensitivities across multiple species using structured population models and standardized effect sizes. Incorporates life history traits...

meta-analysis12 papersLiterature databases, Web of Science search...
analytical

Historical herbarium database analysis for biographical reconstruction

Method for extracting and analyzing historical herbarium specimen data to reconstruct the life and career patterns of past collectors, including temporal and spatial analysis of collecting activities.

historical analysis3 papersConsortium of Southern Rocky Mountain Herbaria database, Spreadsheet software...
analyticalstandardized

Systematic review of microbial macroecology literature

A comprehensive systematic review using database searches, citation network expansion, and vote counting to assess evidence for macroecological rules in microorganisms across multiple taxonomic groups...

literature synthesis2 papersWeb of Science, Google Scholar...
analytical

G-matrix analysis (Plantae)

Compilation and analysis of published plant population divergence data paired with evolvability estimates to test macroevolutionary predictions. Uses proportional divergence metrics and meta-analytica...

comparative analysis1 paperliterature databases, statistical software...
analytical

ICP-AES elemental analysis

Acid digestion of plant and soil samples followed by Inductively Coupled Plasma-Atomic Emission Spectrometry to quantify metal concentrations in tissues. Standard laboratory protocol for elemental ana...

chemical analysis1 papernitrile gloves, plastic vials...
analytical

Multi-scale plant-pollinator network aggregation

A method for constructing plant-pollinator interaction networks at multiple temporal scales from temporally-explicit field observations. Networks are aggregated from daily observations to weekly, mont...

network construction1 paperR statistical software, bipartite package ver. 2.13
sampling

Airborne LiDAR Remote Sensing

Data acquired using a Riegl Q1560 dual-channel LiDAR system mounted on a Piper Navajo aircraft. Survey complied with USGS QL1 standard with point density more than 8 pulses per m2.

0 papers
measurement

Barometric pressure water level measurement

Water level elevations obtained using barometric pressure from pressure transducers in wells, combined with TOC elevation and depth measurements.

0 papers
experimental

Elevation gradient snowmelt manipulation experiment

Five sites established along an elevation gradient from 2774m to 3597m with experimental early snowmelt manipulation using paired control and treatment plots.

0 papers
analytical

GIS polygon digitization

Using ArcGIS to digitize habitat polygons and generate random sampling points within appropriate community types.

0 papers
measurement

Leaf trait measurement (Plantae)

Measurement of leaf traits including nitrogen concentration, phosphorus concentration, specific leaf area, and tensile strength in African woody species.

0 papers
analytical

Sensor data filtering

Data ranges for each sensor type were filtered based on a combination of sensor specifications and assumed reasonable values.

0 papers
analytical

Water use efficiency analysis (Plantae)

R script analysis of sex differences in integrated water use efficiency and population operational sex ratios in Valeriana edulis.

0 papers
analytical

Waveform data processing

Processing waveform LiDAR data using Optech LMS software and custom IDL waveform processor to synchronize GPS time tags and geolocate waveforms.

0 papers
computational

nested cross-validation

Statistical validation approach for model selection and parameter optimization to ensure robust performance.

0 papers
experimental

standardised experimental burns

Standardised experimental burns on three types of leaf material (fresh, dried and senesced) to measure flammability parameters.

0 papers